PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Home  BLAST  Prediction  RegMap  ATRM  Download  Help  About  Links
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG022574t5
Common NameTCM_022574
Organism
Theobroma cacao
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 375aa    MW: 40563.2 Da    PI: 7.9898
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG022574t5genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1248.2e-08333354526
                       CHHHCHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKka 26 
                       +r+rr++kNRe+A rsR+RK+ 
  Thecc1EG022574t5 333 RRQRRMIKNRESAARSRARKQT 354
                       79******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.5E-6333354No hitNo description
CDDcd147071.13E-12333353No hitNo description
PROSITE patternPS000360336351IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010152Biological Processpollen maturation
GO:0010187Biological Processnegative regulation of seed germination
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MVITESEIGE VESSLQVDQQ QKNHPFSSLG RQSSIYSLTL DEFQHTVCED GKNFGSMNMD  60
EFITSIWNAE ENQAINSNIY NQQSNCANKQ VSSYVHLSLN ETTSNNGIAK QPSLPRQGSL  120
TLPAPLCRKT VDEVWSEMHK GQQGQGQSNN SNVENAENGT RQPTFGEMTL EDFLIKAGVR  180
EQCMLPAPPP QHQPQYGLYQ SGNNAAGGPG FVSRPIMGVD SKGGFGGSAY QTMPPGGVIG  240
DSSGYVNDCK RGSGYQPTAP PPTTVCYSGK VAAAGAYVRG QAMGVVSPMS PVSSEGMCNS  300
QVDNAANHFG MDMGGLRGRK RIIEGPIEKV VERRQRRMIK NRESAARSRA RKQTGIYSRA  360
RSRIGPIETR ECPS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00294DAPTransfer from AT2G36270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007027726.10.0Basic-leucine zipper transcription factor family protein, putative isoform 5
SwissprotQ9SJN08e-92ABI5_ARATH; Protein ABSCISIC ACID-INSENSITIVE 5
TrEMBLA0A061EUB40.0A0A061EUB4_THECC; Basic-leucine zipper transcription factor family protein, putative isoform 5
STRINGVIT_08s0007g03420.t011e-118(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.11e-81bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]